Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806405.1_cds_XP_016494327.1_8751
CDS Infomation

[gene=LOC107813559] [db_xref=GeneID:107813559] [protein=regulator of nonsense transcripts 1 homolog] [protein_id=XP_016494327.1] [location=join(401..592,803..916,992..1090,1165..1242,1650..1784,2033..2107,2204..2312,2966..3336,3414..3476,3553..3624,3771..3902,4129..4245,4494..4628)] [gbkey=CDS]
Sequence

ATGTTGATTATGCTGTCTATTTGTTTGCAATTCCAGGTACAATACCGTATGCATCCTGCA
TTATCTGAGTTTCCATCAAATAGCTTTTATGAAGGTACACTCCAAAATGGTGTAACCATC
AATGAAAGGCAATCAACAGGCATTGATTTCCCTTGGCCTGTGCCCAACCGTCCCATGTTC
TTTTATGTTCAGATGGGACAAGAGGAGATCAGTGCTAGTGGAACTTCCTATCTGAATAGA
ACTGAAGCTGCAAATGTGGAGAAGATTGTGACTACATTTCTTAAGGGTGGAGTAGTCCCT
AGTCAGATTGGGGTCATAACACCATATGAGGGTCAACGAGCATACATTGTAAATTACATG
GCAAGAAATGGTTCCTTGAGGCAACAACTTTACAAGGAAATTGAGGTTGCAAGTGTTGAT
TCATTTCAAGGGAGGGAAAAGGATTATATTATTTTGTCATGTGTCAGGAGTAATGAACAT
CAGGGCATTGGATTCCTTAATGATCCACGGAGGCTTAATGTTGCCCTTACACGTGCTCGT
TATGGTATTGTTATACTTGGAAATCCTAAAGTTCTTAGCAAACAGCCTCTGTGGAATGGC
TTGTTGACACACTACAAGGAGCATGAGTGCTTGGTAGAAGGTCCTCTGAATAACTTAAAG
CAGAGCATGGTTCAATTTCAGAAGCCCAAAAAGATCTACAATGAGCGCAGACTTTTCTTT
GGTGGTGGACCAGGAATTCCAGGTGACAGTTTTGGATCTGCTTCAGGCCCCAATGCTGAC
AGGAGAAATAGTCGTTCTAGGGGTTCTTATATGGCACCTGGTGTACCCAACGGTACTCAG
AAACCTGGTGTTCATCCTGCTGGTTATCCAATGCCTCGGGTTCCCTTTCCACCTTACCAT
GGAGGCCCTCCACAACCGTATGCAATTCCTACTCGTGGTGCTGTCCATGGGCCTGTTGGA
GCTGTTCCTCATGTTCCACAGCCAGGTAGCCGGGGTTTTGGGGCTGGACGTGGCAATGCC
AATGCACCAATTGGTAGTCATCTCCCTCACCATCAAGGCGCCCAGCAACAGGCTGGAAGT
CTTGGATCTAACTTCAACTTTCCTGCATTGGAGAATCCAAACAGTCAGCCTTCTGTTGGA
GGACCTTTATCTCAGCCTGGATATGCTTCTAATATGGGTATCCAGGGACCAGGCCAGACA
TTTCGGGATGGATATTCTATGGGTAGCATGTCACAGGATTTCGTGGGAGATGATTTCAAG
AGCCAGGGGTCTCATGTTCCATATAACGTTGCTGACTTCTCTACACAGGCTTCTCAAAGT
GGATATGCTGTTGATTATGTAACTCAAGGAGCACAGGCTGGTTTTCCAGGGAACTTCTTA
AACCAGAGTTCGCAATCTGGATACTCCCGTTTTGGTTCAGGAAATGAATTCATGTCACAG
GACTACATGGCTCATGGATCCCAAGGTCTCTTTACTCAAGCTGGATACAATAATCCATCA
CAAGATGATGGTCCACAGAATCATTTTGGCATGTCCAATGCATCTCTTCAGTCTCAGAGT
TCGCTTAATCCACTTTACTCCCAACCATTTGCTCACTACAACACGCAACCATTTAACATG
CAAAGCCAACCTCAGCAGCAAGCCCCACAAGGCCAGGGCTTCCAAAATCAGAAACTTCAC
TACAATAGTTGA

Peptide Sequence

PEP ID

XP_016494327.1
PEP Infomation

PREDICTED: regulator of nonsense transcripts 1 homolog [Nicotiana tabacum]
Sequence

MLIMLSICLQFQVQYRMHPALSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMF
FYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLKGGVVPSQIGVITPYEGQRAYIVNYM
ARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRAR
YGIVILGNPKVLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNERRLFF
GGGPGIPGDSFGSASGPNADRRNSRSRGSYMAPGVPNGTQKPGVHPAGYPMPRVPFPPYH
GGPPQPYAIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNANAPIGSHLPHHQGAQQQAGS
LGSNFNFPALENPNSQPSVGGPLSQPGYASNMGIQGPGQTFRDGYSMGSMSQDFVGDDFK
SQGSHVPYNVADFSTQASQSGYAVDYVTQGAQAGFPGNFLNQSSQSGYSRFGSGNEFMSQ
DYMAHGSQGLFTQAGYNNPSQDDGPQNHFGMSNASLQSQSSLNPLYSQPFAHYNTQPFNM
QSQPQQQAPQGQGFQNQKLHYNS

Transcript Sequence

Gene sequence data has not been registered.